ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 103081.00 86.86 171.10 100.0 MIR124-1HG-216 lncRNA temporal lobe (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 306.00 11.48 0.51 100.0 SNHG10-212 lncRNA temporal lobe (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 25822.41 37.96 42.86 40.64 SNHG19-202 lncRNA temporal lobe (Tissue)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 37436.22 55.03 62.14 67.59 SNHG19-202 lncRNA temporal lobe (Tissue)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 15.85 0.02 0.03 93.24 SNHG19-202 lncRNA temporal lobe (Tissue)
ENST00000686899.3 ENST00000686899.3_562_650_+ 562–650 0.72 0.00 0.00 72.05 SNHG19-202 lncRNA temporal lobe (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 14199.00 25.86 23.57 100.0 MIR222HG-206 lncRNA temporal lobe (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 31106.00 56.65 51.63 86.8 MIR222HG-206 lncRNA temporal lobe (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 633.00 1.15 1.05 100.0 MIR222HG-206 lncRNA temporal lobe (Tissue)
ENST00000688371.3 ENST00000688371.3_190_212_+ 190–212 0.95 2.86 0.00 31.5 MIR302CHG-205 lncRNA temporal lobe (Tissue)
ENST00000688371.3 ENST00000688371.3_313_333_+ 313–333 5.00 15.15 0.01 100.0 MIR302CHG-205 lncRNA temporal lobe (Tissue)
ENST00000688371.3 ENST00000688371.3_190_210_+ 190–210 2.28 6.91 0.00 76.0 MIR302CHG-205 lncRNA temporal lobe (Tissue)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 4.00 12.12 0.01 100.0 MIR302CHG-205 lncRNA temporal lobe (Tissue)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 7.00 21.21 0.01 100.0 MIR302CHG-205 lncRNA temporal lobe (Tissue)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 9.00 27.27 0.01 100.0 MIR302CHG-205 lncRNA temporal lobe (Tissue)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 3.00 0.83 0.00 100.0 RPSA-216 retained intron temporal lobe (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 10769.00 1.10 17.88 72.45 MIR99AHG-370 lncRNA temporal lobe (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 936103.00 95.91 1553.80 98.71 MIR99AHG-370 lncRNA temporal lobe (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 206.00 77.44 0.34 100.0 HPS4-237 retained intron temporal lobe (Tissue)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 1631.00 87.97 2.71 100.0 MEG8-253 lncRNA temporal lobe (Tissue)
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 251.00 13.44 0.42 100.0 MEG9-206 lncRNA temporal lobe (Tissue)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 412.00 22.06 0.68 100.0 MEG9-206 lncRNA temporal lobe (Tissue)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 217.00 11.62 0.36 100.0 MEG9-206 lncRNA temporal lobe (Tissue)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 523.00 12.44 0.87 100.0 DNAJC5-203 nonsense mediated decay temporal lobe (Tissue)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 1253.00 23.10 2.08 100.0 ENST00000707189 TEC temporal lobe (Tissue)