ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 374.00 0.05 0.62 100.0 MIR17HG-214 lncRNA temporal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 317716.24 45.82 527.36 50.96 MIR17HG-214 lncRNA temporal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 77.00 0.01 0.13 100.0 MIR17HG-214 lncRNA temporal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 1087.00 0.16 1.80 100.0 MIR17HG-214 lncRNA temporal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 337581.48 48.68 560.34 52.21 MIR17HG-214 lncRNA temporal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 14174.00 2.04 23.53 100.0 MIR17HG-214 lncRNA temporal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 452.00 0.07 0.75 100.0 MIR17HG-214 lncRNA temporal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 10416.00 1.50 17.29 100.0 MIR17HG-214 lncRNA temporal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 1926.00 0.28 3.20 100.0 MIR17HG-214 lncRNA temporal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 1875.00 0.25 3.11 100.0 SNHG32-223 lncRNA temporal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 2128.00 0.28 3.53 100.0 SNHG32-223 lncRNA temporal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 2680.00 0.35 4.45 100.0 SNHG32-223 lncRNA temporal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 5629.00 0.74 9.34 58.79 SNHG32-223 lncRNA temporal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 726250.00 95.59 1205.47 100.0 SNHG32-223 lncRNA temporal lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 53645.00 73.08 89.04 94.49 SNHG32-227 lncRNA temporal lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 1004.00 1.37 1.67 100.0 SNHG32-227 lncRNA temporal lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 2363.00 3.22 3.92 100.0 SNHG32-227 lncRNA temporal lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 3369.00 4.59 5.59 100.0 SNHG32-227 lncRNA temporal lobe (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 266.00 69.63 0.44 100.0 B4GALT1-203 nonsense mediated decay temporal lobe (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 750.00 2.95 1.24 100.0 ENST00000722183 lncRNA temporal lobe (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 12494.00 49.11 20.74 81.1 ENST00000722183 lncRNA temporal lobe (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 3114.00 12.24 5.17 100.0 ENST00000722183 lncRNA temporal lobe (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 2488.00 82.71 4.13 100.0 MIR34BHG-202 lncRNA temporal lobe (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 44900.00 79.70 74.53 83.61 THBS3-AS1-228 lncRNA temporal lobe (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 53.00 72.60 0.09 100.0 MIR200CHG-202 lncRNA temporal lobe (Tissue)