ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 215.00 0.08 0.36 100.0 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 152253.93 55.45 252.72 69.71 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 14445.00 5.26 23.98 85.32 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 367.00 0.13 0.61 100.0 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 4192.00 1.53 6.96 100.0 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 131.00 0.05 0.22 100.0 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 1.00 0.00 0.00 100.0 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 7259.00 2.64 12.05 99.64 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 3784.00 3.09 6.28 78.49 SNHG14-323 lncRNA temporal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 6286.00 1.79 10.43 90.08 MEG8-251 lncRNA temporal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 1424.00 0.41 2.36 68.43 MEG8-251 lncRNA temporal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 328194.00 93.60 544.76 99.43 MEG8-251 lncRNA temporal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 1054.00 0.30 1.75 48.68 MEG8-251 lncRNA temporal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 1589.00 0.45 2.64 100.0 MEG8-251 lncRNA temporal lobe (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 30306.00 29.25 50.30 54.83 SNHG14-336 lncRNA temporal lobe (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 65856.00 63.57 109.31 88.32 SNHG14-336 lncRNA temporal lobe (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 22802.00 56.65 37.85 94.71 SNHG14-341 lncRNA temporal lobe (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 1244.00 32.74 2.06 100.0 NCL-211 retained intron temporal lobe (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 898.00 5.13 1.49 100.0 FMN2-209 protein coding CDS not defined temporal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 5.00 0.05 0.01 100.0 LINC02739-203 lncRNA temporal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 31.00 0.32 0.05 26.72 LINC02739-203 lncRNA temporal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 1846.00 19.12 3.06 100.0 LINC02739-203 lncRNA temporal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 969.00 10.04 1.61 100.0 LINC02739-203 lncRNA temporal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 333.00 3.45 0.55 100.0 LINC02739-203 lncRNA temporal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 85.00 0.88 0.14 73.28 LINC02739-203 lncRNA temporal lobe (Tissue)