ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 8713.00 86.83 14.46 100.0 SLC49A4-201 protein coding temporal lobe (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 2134.00 7.17 3.54 100.0 ATP5MC3-201 protein coding temporal lobe (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 635.00 93.93 1.05 100.0 CDC25A-201 protein coding temporal lobe (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 2496.00 85.33 4.14 100.0 BLOC1S4-201 protein coding temporal lobe (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 400.00 6.29 0.66 100.0 ATAD5-201 protein coding temporal lobe (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 1755.00 50.72 2.91 100.0 SLITRK5-201 protein coding temporal lobe (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 82.00 50.00 0.14 100.0 HASPIN-201 protein coding temporal lobe (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 994.00 49.90 1.65 100.0 PRR14L-201 protein coding temporal lobe (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 8292.00 98.19 13.76 100.0 ATG101-201 protein coding temporal lobe (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 1745.00 85.41 2.90 100.0 PRICKLE1-201 protein coding temporal lobe (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 992.00 97.73 1.65 99.8 MIR133A2-201 miRNA temporal lobe (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 2.00 2.94 0.00 100.0 PBLD-204 protein coding temporal lobe (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 2857872.00 91.74 4743.67 99.36 MIRLET7BHG-201 lncRNA temporal lobe (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 136797.00 4.39 227.06 87.15 MIRLET7BHG-201 lncRNA temporal lobe (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 14.00 1.11 0.02 37.84 MIR375-201 miRNA temporal lobe (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 1237.00 98.33 2.05 98.8 MIR375-201 miRNA temporal lobe (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 9028.00 68.29 14.99 100.0 MIR30E-201 miRNA temporal lobe (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 2339.00 17.69 3.88 100.0 MIR30E-201 miRNA temporal lobe (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 2126.00 50.82 3.53 100.0 MIR29A-201 miRNA temporal lobe (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 2626.00 87.36 4.36 100.0 MIR345-201 miRNA temporal lobe (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 279316.00 97.78 463.63 100.0 MIR16-2-201 miRNA temporal lobe (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 90648.00 89.07 150.46 100.0 MIR340-201 miRNA temporal lobe (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 5607.00 5.51 9.31 100.0 MIR340-201 miRNA temporal lobe (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 26538.00 80.33 44.05 100.0 MIR107-201 miRNA temporal lobe (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 8017.00 92.37 13.31 94.52 MIR381-201 miRNA temporal lobe (Tissue)