ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 4315.00 0.55 15.27 79.85 EIF4A2-219 retained intron parietal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 67339.00 8.62 238.22 65.18 EIF4A2-219 retained intron parietal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 345.00 0.04 1.22 100.0 EIF4A2-219 retained intron parietal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 414656.00 53.08 1466.93 90.8 EIF4A2-219 retained intron parietal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 2150.00 0.28 7.61 100.0 EIF4A2-219 retained intron parietal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 10793.00 1.38 38.18 49.9 EIF4A2-219 retained intron parietal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_343_434_+ 343–434 3.00 0.00 0.01 100.0 EIF4A2-219 retained intron parietal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 617.00 0.08 2.18 100.0 EIF4A2-219 retained intron parietal lobe (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 13777.00 93.60 48.74 100.0 RPS8-207 protein coding CDS not defined parietal lobe (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 311.00 15.82 1.10 100.0 RPL7A-206 protein coding CDS not defined parietal lobe (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 487.00 24.77 1.72 100.0 RPL7A-206 protein coding CDS not defined parietal lobe (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 175.00 8.90 0.62 100.0 RPL7A-206 protein coding CDS not defined parietal lobe (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 3154.00 0.23 11.16 100.0 RPL21-209 retained intron parietal lobe (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 2647.00 0.20 9.36 100.0 RPL21-209 retained intron parietal lobe (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 1239159.00 91.97 4383.76 99.65 RPL21-209 retained intron parietal lobe (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 999.00 0.07 3.53 100.0 RPL21-209 retained intron parietal lobe (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 89763.00 6.66 317.55 98.85 RPL21-209 retained intron parietal lobe (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 61.00 44.53 0.22 100.0 GABRE-209 retained intron parietal lobe (Tissue)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 278.00 0.15 0.98 100.0 RPL13A-212 retained intron parietal lobe (Tissue)
ENST00000488946.1 ENST00000488946.1_1363_1444_+ 1363–1444 3237.00 1.75 11.45 100.0 RPL13A-212 retained intron parietal lobe (Tissue)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 238.00 0.13 0.84 100.0 RPL13A-212 retained intron parietal lobe (Tissue)
ENST00000488946.1 ENST00000488946.1_1364_1441_+ 1364–1441 1756.00 0.95 6.21 72.56 RPL13A-212 retained intron parietal lobe (Tissue)
ENST00000488946.1 ENST00000488946.1_155_235_+ 155–235 145719.00 78.76 515.51 97.42 RPL13A-212 retained intron parietal lobe (Tissue)
ENST00000488946.1 ENST00000488946.1_148_235_+ 148–235 2.00 0.00 0.01 100.0 RPL13A-212 retained intron parietal lobe (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 10.00 0.01 0.04 100.0 RPL13A-212 retained intron parietal lobe (Tissue)