ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 457.00 12.37 1.62 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 842.00 34.01 2.98 94.93 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 35.00 0.00 0.12 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 357.00 0.05 1.26 57.86 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 158.00 30.74 0.56 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 178.00 11.24 0.63 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 1142402.00 98.65 4041.47 99.83 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 393.00 2.12 1.39 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 7816.00 42.10 27.65 73.65 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 5244.00 65.39 18.55 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 806.00 62.14 2.85 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 862.00 24.93 3.05 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 145940.00 97.18 516.29 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 7674.00 97.14 27.15 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 1001.00 24.40 3.54 93.29 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 20.00 0.49 0.07 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 429.00 0.04 1.52 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 3494.00 69.88 12.36 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 71.00 1.63 0.25 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 1249.00 34.95 4.42 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 222.00 6.21 0.79 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 27.00 0.76 0.10 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 2.00 18.18 0.01 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA parietal lobe (Tissue)