ENCFF001REQ

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 336.00 0.37 0.85 3.75 SNHG26-250 lncRNA K562 (Cell line)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 5601.00 9.72 14.21 100.0 LINC02422-207 lncRNA K562 (Cell line)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 2816.00 6.61 7.15 100.0 ENST00000753088 lncRNA K562 (Cell line)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 417.00 0.98 1.06 100.0 ENST00000753088 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 1699.05 3.42 4.31 64.33 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 14570.00 29.36 36.98 100.0 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 695.00 1.40 1.76 100.0 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 1285.00 2.59 3.26 100.0 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 1279.56 2.58 3.25 21.01 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 5044.60 10.17 12.80 80.09 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 504.12 1.02 1.28 33.45 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 748.86 1.51 1.90 34.26 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 6507.00 13.11 16.51 100.0 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 1587.09 3.20 4.03 81.98 ENST00000756336 lncRNA K562 (Cell line)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 5274.00 93.94 13.38 100.0 ENST00000756452 lncRNA K562 (Cell line)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 182.00 0.32 0.46 100.0 ENST00000760093 lncRNA K562 (Cell line)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 35.00 0.06 0.09 100.0 ENST00000760093 lncRNA K562 (Cell line)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 11.00 68.75 0.03 100.0 SNHG14-356 lncRNA K562 (Cell line)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 13538.00 17.49 34.36 95.93 LINC02806-241 lncRNA K562 (Cell line)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 1298.00 1.68 3.29 100.0 LINC02806-241 lncRNA K562 (Cell line)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 569.00 0.74 1.44 100.0 LINC02806-241 lncRNA K562 (Cell line)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 5836.00 7.54 14.81 58.77 LINC02806-241 lncRNA K562 (Cell line)
ENST00000762395.1 ENST00000762395.1_307_324_+ 307–324 18672.00 24.12 47.39 100.0 LINC02806-241 lncRNA K562 (Cell line)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 20035.00 90.28 50.85 100.0 EHBP1-AS1-210 lncRNA K562 (Cell line)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 1945.00 6.90 4.94 100.0 ENST00000770398 lncRNA K562 (Cell line)