ENCFF001REQ
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | K562 (Cell line) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR000AES |
| Description: | Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study. |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000387347.2 | ENST00000387347.2_1132_1147_+ | 1132–1147 | 24760.00 | 11.44 | 62.84 | 100.0 | MT-RNR2-201 | Mt rRNA | K562 (Cell line) |
| ENST00000387347.2 | ENST00000387347.2_1357_1376_+ | 1357–1376 | 59472.00 | 27.48 | 150.93 | 100.0 | MT-RNR2-201 | Mt rRNA | K562 (Cell line) |
| ENST00000387365.1 | ENST00000387365.1_1_58_+ | 1–58 | 1588.00 | 6.08 | 4.03 | 100.0 | MT-TI-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387365.1 | ENST00000387365.1_1_51_+ | 1–51 | 15435.00 | 59.08 | 39.17 | 98.14 | MT-TI-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387372.1 | ENST00000387372.1_1_32_+ | 1–32 | 14305.00 | 31.08 | 36.30 | 67.33 | MT-TQ-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387372.1 | ENST00000387372.1_1_55_+ | 1–55 | 962.00 | 2.09 | 2.44 | 100.0 | MT-TQ-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387372.1 | ENST00000387372.1_1_36_+ | 1–36 | 9548.00 | 20.74 | 24.23 | 81.49 | MT-TQ-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387372.1 | ENST00000387372.1_1_30_+ | 1–30 | 6215.77 | 13.50 | 15.77 | 55.3 | MT-TQ-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387377.1 | ENST00000387377.1_1_31_+ | 1–31 | 16509.00 | 46.67 | 41.90 | 95.02 | MT-TM-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387377.1 | ENST00000387377.1_1_51_+ | 1–51 | 658.00 | 1.86 | 1.67 | 100.0 | MT-TM-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387405.1 | ENST00000387405.1_1_24_+ | 1–24 | 2355.00 | 51.64 | 5.98 | 100.0 | MT-TC-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_65_+ | 1–65 | 169582.00 | 73.66 | 430.38 | 100.0 | MT-TY-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_50_+ | 1–50 | 212.00 | 0.09 | 0.54 | 100.0 | MT-TY-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_28_+ | 1–28 | 10170.00 | 4.42 | 25.81 | 100.0 | MT-TY-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_32_+ | 1–32 | 27260.00 | 11.84 | 69.18 | 87.5 | MT-TY-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_56_+ | 1–56 | 343.00 | 0.15 | 0.87 | 100.0 | MT-TY-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_37_+ | 1–37 | 6032.00 | 2.62 | 15.31 | 69.36 | MT-TY-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387419.1 | ENST00000387419.1_1_51_+ | 1–51 | 1007.00 | 45.08 | 2.56 | 100.0 | MT-TD-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387421.1 | ENST00000387421.1_1_52_+ | 1–52 | 43226.00 | 45.79 | 109.70 | 100.0 | MT-TK-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387421.1 | ENST00000387421.1_1_28_+ | 1–28 | 4944.00 | 5.24 | 12.55 | 100.0 | MT-TK-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387421.1 | ENST00000387421.1_1_31_+ | 1–31 | 50.00 | 0.05 | 0.13 | 100.0 | MT-TK-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387421.1 | ENST00000387421.1_1_58_+ | 1–58 | 16133.00 | 17.09 | 40.94 | 100.0 | MT-TK-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387449.1 | ENST00000387449.1_1_26_+ | 1–26 | 11675.00 | 46.46 | 29.63 | 100.0 | MT-TS2-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387449.1 | ENST00000387449.1_1_53_+ | 1–53 | 82.00 | 0.33 | 0.21 | 100.0 | MT-TS2-201 | Mt tRNA | K562 (Cell line) |
| ENST00000387449.1 | ENST00000387449.1_1_20_+ | 1–20 | 7593.00 | 30.21 | 19.27 | 78.56 | MT-TS2-201 | Mt tRNA | K562 (Cell line) |