ENCFF001REL

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 18073.54 59.95 33.60 62.78 MIR93-201 miRNA K562 (Cell line)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 10274.08 34.08 19.10 42.33 MIR93-201 miRNA K562 (Cell line)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 3786.00 73.05 7.04 86.14 MIR532-201 miRNA K562 (Cell line)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 2274.00 83.76 4.23 100.0 MIR15B-201 miRNA K562 (Cell line)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 92.00 62.59 0.17 100.0 MIR542-201 miRNA K562 (Cell line)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 3176.00 75.31 5.90 100.0 MIR500A-201 miRNA K562 (Cell line)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 166.00 3.94 0.31 100.0 MIR500A-201 miRNA K562 (Cell line)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 61.00 14.02 0.11 98.39 MIR30A-201 miRNA K562 (Cell line)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 339.00 77.93 0.63 100.0 MIR30A-201 miRNA K562 (Cell line)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 4.00 0.92 0.01 80.0 MIR30A-201 miRNA K562 (Cell line)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 667.00 1.26 1.24 100.0 MIR27B-201 miRNA K562 (Cell line)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 44041.00 82.93 81.87 86.09 MIR27B-201 miRNA K562 (Cell line)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 556.00 87.97 1.03 100.0 MIR196A2-201 miRNA K562 (Cell line)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 1619.00 82.81 3.01 100.0 MIR577-201 miRNA K562 (Cell line)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 148.00 83.62 0.28 93.08 MIR654-201 miRNA K562 (Cell line)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 25.00 96.15 0.05 100.0 MIR204-201 miRNA K562 (Cell line)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 65.00 67.71 0.12 100.0 MIR152-201 miRNA K562 (Cell line)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 2.00 100.00 0.00 100.0 MIR138-1-201 miRNA K562 (Cell line)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 5561.00 69.34 10.34 100.0 MIR30C1-201 miRNA K562 (Cell line)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 1018.00 77.53 1.89 100.0 MIR660-201 miRNA K562 (Cell line)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 1.00 4.55 0.00 100.0 MIR125B1-201 miRNA K562 (Cell line)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 20.00 90.91 0.04 100.0 MIR125B1-201 miRNA K562 (Cell line)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 58.00 66.67 0.11 100.0 MIR493-201 miRNA K562 (Cell line)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 24.00 27.59 0.04 100.0 MIR493-201 miRNA K562 (Cell line)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 274630.86 66.92 510.53 70.59 MIR182-201 miRNA K562 (Cell line)