ENCFF001REL

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 4.00 66.67 0.01 100.0 MIR508-201 miRNA K562 (Cell line)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 294.00 91.59 0.55 100.0 MIR215-201 miRNA K562 (Cell line)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 65.00 1.78 0.12 100.0 MIR181A2-201 miRNA K562 (Cell line)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 315976.00 98.88 587.38 99.67 MIR191-201 miRNA K562 (Cell line)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 3.00 75.00 0.01 100.0 MIR149-201 miRNA K562 (Cell line)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 57.00 16.06 0.11 100.0 MIR181C-201 miRNA K562 (Cell line)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 245.00 69.01 0.46 86.88 MIR181C-201 miRNA K562 (Cell line)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 518.00 93.00 0.96 100.0 MIR194-1-201 miRNA K562 (Cell line)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 2242.00 81.08 4.17 84.67 MIR128-2-201 miRNA K562 (Cell line)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 33.00 91.67 0.06 97.06 MIR99A-201 miRNA K562 (Cell line)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 1.00 2.44 0.00 100.0 MIR28-201 miRNA K562 (Cell line)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 27.00 65.85 0.05 100.0 MIR28-201 miRNA K562 (Cell line)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 15606.00 77.18 29.01 100.0 MIR183-201 miRNA K562 (Cell line)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 30.00 10.53 0.06 100.0 MIR145-201 miRNA K562 (Cell line)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 210.00 73.68 0.39 100.0 MIR145-201 miRNA K562 (Cell line)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 54530.00 94.42 101.37 96.86 MIR186-201 miRNA K562 (Cell line)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 3.00 100.00 0.01 100.0 MIR200B-201 miRNA K562 (Cell line)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 386.00 73.66 0.72 100.0 MIR218-1-201 miRNA K562 (Cell line)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 623.00 86.53 1.16 93.12 MIR181B2-201 miRNA K562 (Cell line)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 784.00 84.76 1.46 88.29 MIR10B-201 miRNA K562 (Cell line)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 45422.48 61.86 84.44 73.03 MIR130B-201 miRNA K562 (Cell line)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 21160.57 28.82 39.34 31.39 MIR130B-201 miRNA K562 (Cell line)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 3118.00 4.25 5.80 100.0 MIR130B-201 miRNA K562 (Cell line)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 7.00 1.63 0.01 100.0 MIR199A1-201 miRNA K562 (Cell line)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 5.00 38.46 0.01 100.0 MIR487B-201 miRNA K562 (Cell line)