ENCFF001REL

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 20.00 0.13 0.04 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 9403.00 50.48 17.48 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 193.00 15.74 0.36 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 163974.00 55.53 304.82 95.9 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 2113.00 0.72 3.93 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 539.00 0.87 1.00 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 8265.00 47.67 15.36 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 3591.00 5.31 6.68 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 1021.00 3.25 1.90 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 6402.00 20.36 11.90 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 11740.00 37.34 21.82 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 132.00 8.14 0.25 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA K562 (Cell line)