ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 149.00 19.76 0.17 100.0 Y_RNA.14-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 2416.00 51.98 2.70 100.0 SNORD115-34-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 40.00 4.85 0.04 100.0 RNU5E-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 33.00 0.78 0.04 15.71 RNA5SP370-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 373.00 31.42 0.42 100.0 SNORA31-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 123.00 2.92 0.14 58.02 RNA5SP389-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 19.00 0.45 0.02 100.0 RNA5SP389-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 117.00 2.78 0.13 64.29 RNA5SP389-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 350.00 8.31 0.39 100.0 RNA5SP389-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 701.00 0.90 0.78 100.0 RNU5A-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 9915.00 12.68 11.07 79.66 RNU5A-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 1691.73 2.16 1.89 50.21 RNU5A-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 10805.00 13.82 12.07 83.68 RNU5A-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 6632.00 8.48 7.41 77.49 RNU5A-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 3870.00 4.95 4.32 70.21 RNU5A-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 939.00 1.20 1.05 100.0 RNU5A-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 8930.00 11.42 9.97 80.95 RNU5A-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 2376.00 3.04 2.65 39.32 RNU5A-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 2107.16 2.69 2.35 60.34 RNU5A-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 2826.00 3.61 3.16 55.83 RNU5A-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 348.00 0.45 0.39 100.0 RNU5A-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 1956.79 2.50 2.19 67.11 RNU5A-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 1630.12 2.08 1.82 35.55 RNU5A-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 3440.00 4.40 3.84 33.11 RNU5A-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 994.00 93.77 1.11 100.0 SNORD114-14-201 snoRNA hepatocyte (In vitro differentiated cells)