ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 180.00 0.70 0.20 100.0 SNORD104-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 1875.00 7.34 2.09 100.0 SNORD104-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 13095.00 74.26 14.62 94.22 SNORD115-9-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 142613.00 87.72 159.26 96.96 RNA5SP358-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 76.00 1.79 0.08 71.7 RNA5SP145-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 6.00 27.27 0.01 100.0 Y_RNA.105-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 1796.00 72.77 2.01 100.0 RNY4P9-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 1159.00 6.92 1.29 100.0 RNU5B-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 5908.00 35.29 6.60 100.0 RNU5B-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 85.00 0.51 0.09 100.0 RNU5B-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 753.00 4.50 0.84 69.02 RNU5B-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000363286.1 ENST00000363286.1_1_69_+ 1–69 64.00 0.38 0.07 100.0 RNU5B-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000363286.1 ENST00000363286.1_1_86_+ 1–86 99.00 0.59 0.11 100.0 RNU5B-1-201 snRNA hepatocyte (In vitro differentiated cells)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 60856.00 94.87 67.96 98.14 SNORD115-18-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 334.00 32.52 0.37 98.53 RNY4P27-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 9.00 0.88 0.01 64.29 RNY4P27-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 394.00 10.85 0.44 100.0 Y_RNA.136-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 6811.00 74.86 7.61 100.0 SNORD115-41-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000363633.1 ENST00000363633.1_2_82_+ 2–82 241.00 9.07 0.27 100.0 SNORD115-5-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 1916.00 67.97 2.14 100.0 SNORD115-33-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 1244.00 93.04 1.39 97.72 SNORD114-25-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 1451.00 96.67 1.62 100.0 SNORD113-7-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 3046.00 57.55 3.40 100.0 SNORD115-8-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 235.00 25.03 0.26 100.0 Y_RNA.181-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 3285.00 60.13 3.67 100.0 SNORD115-16-201 snoRNA hepatocyte (In vitro differentiated cells)