ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 227.00 47.39 0.25 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 279.00 46.81 0.31 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 243.00 25.29 0.27 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 57161.00 96.60 63.83 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 1638.00 80.49 1.83 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 27819.00 67.91 31.07 95.62 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 111.00 0.27 0.12 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 437.00 0.17 0.49 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 1152.00 9.29 1.29 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 151.00 8.00 0.17 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 1684.00 16.11 1.88 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 1281.00 12.26 1.43 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 118.00 1.13 0.13 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 4722.00 95.61 5.27 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA hepatocyte (In vitro differentiated cells)