ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 18471.00 78.12 20.63 95.83 MIR30D-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 3411.00 14.43 3.81 80.94 MIR30D-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 775.00 75.32 0.87 100.0 MIR126-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 211.00 20.51 0.24 94.2 MIR126-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 25.00 13.51 0.03 100.0 MIR374A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 620.00 66.52 0.69 100.0 MIR31-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 770.00 0.12 0.86 89.64 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 89.00 0.01 0.10 100.0 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 1516.00 0.24 1.69 54.99 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 30.00 0.00 0.03 100.0 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 734.88 0.12 0.82 39.17 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 177.00 0.03 0.20 84.29 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 1123.00 0.18 1.25 50.07 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 137.00 0.02 0.15 76.97 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 433.25 0.07 0.48 47.35 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 1507.00 0.24 1.68 64.85 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 1074.00 0.17 1.20 56.44 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 787.00 0.12 0.88 66.69 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 725.20 0.11 0.81 55.19 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 1867.00 0.29 2.08 62.09 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 45.00 0.01 0.05 100.0 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 3048.00 0.48 3.40 86.57 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 5987.00 0.94 6.69 94.25 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 3880.00 0.61 4.33 82.4 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 418557.00 65.74 467.40 99.91 RNA5S12-201 rRNA hepatocyte (In vitro differentiated cells)