ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 347.00 4.21 1.48 100.0 RNA5SP486-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 1391.00 85.55 5.92 100.0 SCARNA5-201 scaRNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 1188.00 0.24 5.06 100.0 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 495.00 0.10 2.11 100.0 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 221.00 0.04 0.94 37.02 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 86.00 0.02 0.37 100.0 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 15660.00 3.10 66.68 64.67 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 4460.00 0.88 18.99 81.64 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 939.00 0.19 4.00 100.0 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 92723.00 18.37 394.84 98.93 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 337641.00 66.90 1437.77 99.78 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 99.00 0.02 0.42 100.0 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1354.00 0.27 5.77 54.75 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 6591.00 1.31 28.07 100.0 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 2038.00 72.99 8.68 77.67 MIR3142HG-201 lncRNA gastroesophageal sphincter (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 4200.00 87.70 17.88 100.0 SNHG6-204 retained intron gastroesophageal sphincter (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 5696.00 17.37 24.26 100.0 MIR151A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 23975.00 73.10 102.09 90.46 MIR151A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 717.00 99.31 3.05 100.0 DENND3-221 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 597.00 6.61 2.54 100.0 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 562.00 6.23 2.39 73.56 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 37.00 0.41 0.16 100.0 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 166.00 1.84 0.71 61.03 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 307.00 3.40 1.31 69.3 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 106.00 1.17 0.45 38.97 WDR74-204 protein coding gastroesophageal sphincter (Tissue)