ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 3338.00 76.31 14.21 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 247.00 4.07 1.05 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 108860.00 97.59 463.56 99.82 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 11.00 0.09 0.05 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 4652.00 38.77 19.81 79.6 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 41.00 10.85 0.17 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 14.00 2.01 0.06 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 48.00 4.80 0.20 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 5636.00 90.98 24.00 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 796.00 95.56 3.39 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 10573.00 37.84 45.02 94.59 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 97.00 0.35 0.41 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 22.00 0.02 0.09 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 1685.00 65.39 7.18 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 79.00 1.97 0.34 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 65.00 1.30 0.28 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 518.00 10.37 2.21 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 116.00 2.32 0.49 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA gastroesophageal sphincter (Tissue)