ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 70.00 80.46 0.47 100.0 SNORD14D-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 43.00 8.76 0.29 100.0 Y_RNA.555-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 7477.00 93.46 49.83 94.56 MIR25-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 59664.00 93.87 397.59 97.99 MIR99B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 4358.00 32.16 29.04 82.74 MIR23B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 8804.00 64.96 58.67 86.21 MIR23B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 28.00 37.33 0.19 100.0 MIR203A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 3791.00 85.44 25.26 90.2 MIR199B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 95.00 2.14 0.63 100.0 MIR199B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 813.00 93.88 5.42 100.0 MIR30B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 1544.00 96.02 10.29 100.0 MIR181D-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 6.00 100.00 0.04 100.0 MIR215-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 615.00 0.92 4.10 100.0 MIR181A2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 35748.00 98.60 238.22 99.41 MIR191-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 31.00 88.57 0.21 93.94 MIR149-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 1179.00 91.82 7.86 98.17 MIR181C-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 37.00 2.88 0.25 100.0 MIR181C-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 27.00 96.43 0.18 100.0 MIR194-1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 202.00 75.09 1.35 78.29 MIR128-2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 742.00 82.72 4.94 90.27 MIR99A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 312608.00 89.83 2083.15 92.26 MIR28-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 1215.00 0.35 8.10 82.32 MIR28-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 3046.00 0.88 20.30 100.0 MIR28-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 30.00 76.92 0.20 100.0 MIR183-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 2307.00 15.20 15.37 100.0 MIR145-201 miRNA esophagus muscularis mucosa (Tissue)