ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 45.00 0.33 0.30 100.0 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 2939.00 21.44 19.58 99.36 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 977.00 7.13 6.51 100.0 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 731.00 5.33 4.87 100.0 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 1821.00 13.28 12.13 88.83 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 1493.63 10.90 9.95 31.58 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 3184.43 23.23 21.22 67.34 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 2853.00 93.94 19.01 97.97 MIR146B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 36.00 37.11 0.24 100.0 SNHG20-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 8.00 2.99 0.05 100.0 ATP5MK-205 protein coding esophagus muscularis mucosa (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 62.00 23.13 0.41 100.0 ATP5MK-205 protein coding esophagus muscularis mucosa (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 12.00 9.92 0.08 100.0 LINC01556-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 413.00 49.05 2.75 100.0 ATAD3A-202 protein coding esophagus muscularis mucosa (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 8.00 13.11 0.05 42.11 TMC5-202 protein coding esophagus muscularis mucosa (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 15.00 53.57 0.10 100.0 ZMYM2-203 protein coding esophagus muscularis mucosa (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 87.00 2.31 0.58 100.0 RNVU1-7-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 686.00 36.70 4.57 100.0 SNORD24-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 390.00 71.17 2.60 100.0 Y_RNA.389-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 143.00 0.19 0.95 100.0 SNORD101-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 1076.00 1.42 7.17 81.58 SNORD101-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 71871.00 95.16 478.93 99.82 SNORD101-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 634.00 0.84 4.22 100.0 SNORD101-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 27983.00 97.18 186.47 100.0 SNORD37-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 486074.00 97.18 3239.09 99.38 SNORD59A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 107.00 33.02 0.71 100.0 SNORA7B-201 snoRNA esophagus muscularis mucosa (Tissue)