ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 2307.00 15.20 15.37 100.0 MIR145-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 3864.00 97.43 25.75 98.62 MIR186-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 7.00 87.50 0.05 100.0 MIR200B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 88.00 30.14 0.59 100.0 MIR218-1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 4894.00 90.97 32.61 95.14 MIR181B2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 509073.00 86.92 3392.35 87.68 MIR10B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 19.19 21.09 0.13 56.44 MIR130B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 44.91 49.35 0.30 61.52 MIR130B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 11.00 12.09 0.07 100.0 MIR130B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 167.00 3.70 1.11 100.0 MIR199A1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 4.00 44.44 0.03 100.0 MIR487B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 600.93 69.23 4.00 71.88 MIR93-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 192.81 22.21 1.28 26.02 MIR93-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 413.00 86.40 2.75 91.98 MIR532-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 29.00 87.88 0.19 100.0 MIR15B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 135.00 81.33 0.90 100.0 MIR150-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 32.00 57.14 0.21 100.0 MIR542-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 187.00 54.52 1.25 100.0 MIR500A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 16.00 4.66 0.11 100.0 MIR500A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 109557.00 79.18 730.06 97.63 MIR30A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 10701.00 7.73 71.31 100.0 MIR30A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 509.00 0.37 3.39 100.0 MIR30A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 13481.00 9.74 89.83 83.53 MIR30A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 117050.00 90.09 780.00 93.57 MIR27B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 1387.00 1.07 9.24 100.0 MIR27B-201 miRNA esophagus muscularis mucosa (Tissue)