ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 532.00 24.55 3.55 100.0 SNORD114-3-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 65.00 3.69 0.43 100.0 RNA5SP298-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 122.00 32.02 0.81 100.0 SNORD115-38-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 364.00 36.33 2.43 100.0 SNORD115-10-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 297.00 73.51 1.98 100.0 SNORD113-9-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 13.00 14.77 0.09 100.0 SNORD115-20-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 8630.00 76.48 57.51 100.0 SNORD38A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 260.00 2.30 1.73 100.0 SNORD38A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 1426.00 12.64 9.50 100.0 SNORD38A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 3402.00 89.34 22.67 98.13 SNORD114-20-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 88.00 24.11 0.59 95.65 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 3.00 0.82 0.02 100.0 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 3.00 0.82 0.02 100.0 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 9.00 2.47 0.06 100.0 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 56.00 15.34 0.37 55.45 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 18.00 4.93 0.12 100.0 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 42.00 11.51 0.28 91.3 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 352.00 61.01 2.35 100.0 SNORD14C-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 145.00 38.26 0.97 100.0 SNORD115-44-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 1021.00 48.90 6.80 100.0 RNA5SP77-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 7242.00 60.82 48.26 100.0 SNORD114-22-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 4317.00 36.26 28.77 98.27 SNORD114-22-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 2880.00 75.59 19.19 100.0 SNORD6-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 106.00 2.78 0.71 100.0 SNORD6-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 64.00 1.65 0.43 100.0 RNY3-201 misc RNA esophagus muscularis mucosa (Tissue)