ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 150.00 0.21 1.00 100.0 MIR181A1HG-212 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 15.00 17.44 0.10 100.0 C19orf48P-218 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 43.00 50.00 0.29 100.0 C19orf48P-218 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 737.00 63.86 4.91 94.73 SNHG18-220 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 985.00 32.82 6.56 100.0 ENST00000817026 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 2069.00 24.27 13.79 98.76 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 6.00 0.07 0.04 100.0 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 161.96 1.90 1.08 45.11 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 23.85 0.28 0.16 21.88 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 31.00 0.36 0.21 100.0 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 317.82 3.73 2.12 53.41 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 168.30 1.97 1.12 41.45 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 132.00 1.55 0.88 83.02 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 288.49 3.38 1.92 28.01 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 976.10 11.45 6.50 77.04 ENST00000823801 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 790.00 19.61 5.26 23.9 ENST00000827714 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 2515.00 62.42 16.76 76.1 ENST00000827714 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 6744.00 79.11 44.94 100.0 GAS5-377 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 717.00 8.41 4.78 100.0 GAS5-377 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 3.00 0.04 0.02 100.0 GAS5-377 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 703.00 8.25 4.68 100.0 GAS5-377 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 12.00 70.59 0.08 100.0 MIR205HG-245 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 50642.00 90.42 337.47 99.38 ZFAS1-238 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 97.00 0.17 0.65 100.0 ZFAS1-238 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 74.00 0.13 0.49 100.0 ZFAS1-238 lncRNA esophagus muscularis mucosa (Tissue)