ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 9.00 1.15 0.06 100.0 ENST00000772672 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 164.00 25.04 1.09 100.0 ENST00000773843 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 33.00 0.01 0.22 100.0 SNHG12-223 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 170750.00 38.83 1137.84 87.23 SNHG12-223 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 265829.00 60.45 1771.43 98.93 SNHG12-223 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 19068.00 1.27 127.07 100.0 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 1441166.00 95.61 9603.62 97.86 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 278.00 0.02 1.85 100.0 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 905.26 0.06 6.03 47.82 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 488.60 0.03 3.26 38.02 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 999.85 0.07 6.66 39.55 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 3930.00 0.26 26.19 84.35 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 299.00 0.02 1.99 100.0 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 12.00 30.00 0.08 100.0 ENST00000778783 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 340.00 76.92 2.27 81.34 MIR155HG-205 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 14.00 82.35 0.09 100.0 ENST00000784740 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 42.00 1.02 0.28 100.0 ENST00000785178 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 286.00 2.59 1.91 81.95 ENST00000786284 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 3457.00 31.25 23.04 100.0 ENST00000786284 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 63.00 0.57 0.42 27.27 ENST00000786284 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 243.00 6.73 1.62 85.87 ENST00000788343 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 2401.89 42.30 16.01 57.5 ENST00000797550 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 1811.19 31.90 12.07 43.36 ENST00000797550 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 188.00 3.31 1.25 89.95 ENST00000797550 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 61083.00 85.03 407.04 93.39 MIR181A1HG-212 lncRNA esophagus muscularis mucosa (Tissue)