ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1146.00 2.05 7.64 100.0 ZFAS1-238 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 4494.00 44.80 29.95 100.0 ZFAS1-242 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 5040.00 50.24 33.59 100.0 ZFAS1-242 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 1992.00 45.87 13.27 100.0 ENST00000837997 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 1287.00 29.63 8.58 100.0 ENST00000837997 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 4226.00 77.90 28.16 83.11 ENST00000839036 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 90.00 8.46 0.60 100.0 ENST00000849527 lncRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 4615.00 75.26 30.75 96.89 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 19.00 0.31 0.13 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 41.00 0.11 0.27 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 682.00 56.60 4.54 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 101.00 8.38 0.67 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 84.00 16.41 0.56 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 127.00 1.68 0.85 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 115.00 28.82 0.77 74.68 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 174.00 0.47 1.16 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 3.00 50.00 0.02 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 95.00 8.40 0.63 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 134.00 11.85 0.89 83.75 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 7.00 0.62 0.05 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 1898.00 60.87 12.65 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 2760.00 4.31 18.39 83.87 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 156.00 0.24 1.04 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 493.00 0.77 3.29 89.96 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 8649.00 13.51 57.64 44.92 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)