ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 1885.00 20.41 12.56 87.39 LIMD1-AS1-204 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 5927.00 68.17 39.50 87.34 MIR99AHG-262 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 822.00 9.45 5.48 100.0 MIR99AHG-262 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 168.00 77.42 1.12 100.0 SNHG14-270 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 181.00 1.86 1.21 100.0 SNHG14-275 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 336.00 81.36 2.24 91.8 MIR9-2HG-225 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 392.00 50.06 2.61 100.0 MEG8-233 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 107.00 13.67 0.71 100.0 MEG8-233 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 1458.00 4.64 9.72 100.0 SNHG14-278 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 25829.00 82.18 172.12 94.59 SNHG14-278 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 367.00 41.66 2.45 100.0 MEG8-234 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 125.00 14.19 0.83 100.0 MEG8-234 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 696.00 86.03 4.64 100.0 SNHG17-252 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 1067.00 10.79 7.11 66.69 SNHG14-288 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 8057.00 81.46 53.69 96.35 SNHG14-288 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 7.00 1.72 0.05 100.0 SNHG14-295 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 126.00 65.28 0.84 100.0 MEG8-240 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 3154.00 45.10 21.02 100.0 SNHG14-303 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 45.00 8.15 0.30 100.0 SNHG14-306 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 6.00 1.09 0.04 100.0 SNHG14-306 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 141.00 25.54 0.94 100.0 SNHG14-306 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 9.00 1.63 0.06 100.0 SNHG14-306 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 282.00 11.08 1.88 100.0 ENST00000666735 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 31.00 1.22 0.21 100.0 ENST00000666735 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 611.00 74.97 4.07 100.0 MEG8-242 lncRNA esophagus muscularis mucosa (Tissue)