ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 342.00 1.26 2.28 100.0 NOP56-219 retained intron esophagus muscularis mucosa (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 1617.00 5.97 10.78 69.94 NOP56-219 retained intron esophagus muscularis mucosa (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 81.00 0.22 0.54 51.27 RNA5-8SN2-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 11396.09 31.35 75.94 48.5 RNA5-8SN2-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 16.00 0.04 0.11 100.0 RNA5-8SN2-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 4763.00 13.10 31.74 100.0 RNA5-8SN2-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 6.00 0.02 0.04 100.0 RNA5-8SN2-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 142.00 0.39 0.95 63.68 RNA5-8SN2-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 12663.05 34.83 84.38 53.9 RNA5-8SN2-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 1.00 100.00 0.01 100.0 MIR376A1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 428.00 2.83 2.85 100.0 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 665.52 4.40 4.43 31.47 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 56.00 0.37 0.37 100.0 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 13.00 0.09 0.09 72.22 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 15.00 0.10 0.10 38.46 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 11.00 0.07 0.07 100.0 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 1477.87 9.77 9.85 69.88 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 20.00 0.13 0.13 100.0 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 81.00 0.54 0.54 100.0 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 910.00 6.02 6.06 100.0 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 15.65 0.10 0.10 82.35 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 10.09 0.07 0.07 53.11 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 665.00 5.42 4.43 100.0 U2.6-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 100.00 0.23 0.67 19.96 ENST00000619323 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 41073.00 96.33 273.70 98.26 ENST00000619323 lncRNA esophagus muscularis mucosa (Tissue)