ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 1274.00 80.94 9.19 100.0 MIR500A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 57886.00 13.61 417.41 84.61 MIR30A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 329409.00 77.43 2375.34 96.9 MIR30A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 21910.00 5.15 157.99 100.0 MIR30A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 1795.00 0.42 12.94 100.0 MIR30A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 687.00 0.70 4.95 100.0 MIR27B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 90142.00 92.26 650.01 95.16 MIR27B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 5.00 100.00 0.04 100.0 MIR196A2-201 miRNA upper lobe of left lung (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 2.00 100.00 0.01 100.0 MIR577-201 miRNA upper lobe of left lung (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 27.00 84.38 0.19 100.0 MIR654-201 miRNA upper lobe of left lung (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 187.00 100.00 1.35 100.0 MIR204-201 miRNA upper lobe of left lung (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 870.00 92.06 6.27 100.0 MIR152-201 miRNA upper lobe of left lung (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 40.00 44.94 0.29 100.0 MIR138-1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 2947.00 92.41 21.25 100.0 MIR30C1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 148.00 74.37 1.07 100.0 MIR660-201 miRNA upper lobe of left lung (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 3009.00 72.93 21.70 84.48 MIR125B1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 300.00 7.27 2.16 100.0 MIR125B1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 11.00 50.00 0.08 100.0 MIR493-201 miRNA upper lobe of left lung (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 10.00 45.45 0.07 100.0 MIR493-201 miRNA upper lobe of left lung (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 38106.16 25.21 274.78 28.75 MIR182-201 miRNA upper lobe of left lung (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 91187.42 60.33 657.54 64.54 MIR182-201 miRNA upper lobe of left lung (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 11947.00 89.41 86.15 92.44 MIR100-201 miRNA upper lobe of left lung (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 296.00 95.48 2.13 100.0 MIR301A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 9924.00 92.61 71.56 97.59 MIR130A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 732.00 6.83 5.28 42.78 MIR130A-201 miRNA upper lobe of left lung (Tissue)