ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 330443.00 98.23 2382.79 98.83 MIRLET7F2-201 miRNA upper lobe of left lung (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 603.00 77.31 4.35 100.0 MIR652-201 miRNA upper lobe of left lung (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 21.00 72.41 0.15 100.0 MIR653-201 miRNA upper lobe of left lung (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 3758.00 77.42 27.10 100.0 MIR140-201 miRNA upper lobe of left lung (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 413.00 37.01 2.98 56.73 MIR106B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 29.00 2.60 0.21 100.0 MIR106B-201 miRNA upper lobe of left lung (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 847.00 72.39 6.11 100.0 SNORD41-201 snoRNA upper lobe of left lung (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 319.00 4.57 2.30 40.48 MT-TF-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 1226.00 17.56 8.84 100.0 MT-TF-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 1270.00 18.19 9.16 85.93 MT-TF-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 957.00 41.75 6.90 100.0 MT-TV-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 299.00 2.15 2.16 81.03 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 233.00 1.68 1.68 100.0 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 120.00 0.86 0.87 100.0 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 465.00 3.35 3.35 92.45 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 16.00 0.12 0.12 100.0 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 26.00 0.19 0.19 100.0 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 54.00 0.39 0.39 100.0 MT-RNR2-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 193.00 35.28 1.39 92.79 MT-TI-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 96.00 17.55 0.69 100.0 MT-TI-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 3303.81 9.82 23.82 62.85 MT-TQ-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 48.00 0.14 0.35 100.0 MT-TQ-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 8170.00 24.30 58.91 79.91 MT-TQ-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 1713.95 5.10 12.36 53.23 MT-TQ-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 1714.00 39.90 12.36 61.97 MT-TM-201 Mt tRNA upper lobe of left lung (Tissue)