ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 182.00 78.11 1.31 81.61 MIR128-2-201 miRNA upper lobe of left lung (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 1375.00 74.16 9.91 84.3 MIR99A-201 miRNA upper lobe of left lung (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 449.00 0.71 3.24 82.08 MIR28-201 miRNA upper lobe of left lung (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 554.00 0.87 3.99 100.0 MIR28-201 miRNA upper lobe of left lung (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 57079.00 89.69 411.59 92.42 MIR28-201 miRNA upper lobe of left lung (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 1082.00 65.74 7.80 100.0 MIR183-201 miRNA upper lobe of left lung (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 302.00 10.63 2.18 100.0 MIR145-201 miRNA upper lobe of left lung (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 2088.00 73.50 15.06 100.0 MIR145-201 miRNA upper lobe of left lung (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 9634.00 97.62 69.47 98.58 MIR186-201 miRNA upper lobe of left lung (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 666.00 83.15 4.80 100.0 MIR200B-201 miRNA upper lobe of left lung (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 230.00 30.14 1.66 100.0 MIR218-1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 39881.00 91.13 287.58 95.28 MIR181B2-201 miRNA upper lobe of left lung (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 130707.00 88.95 942.52 89.52 MIR10B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 127.88 58.13 0.92 60.89 MIR130B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 2.00 0.91 0.01 100.0 MIR130B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 67.17 30.53 0.48 54.17 MIR130B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 608.00 9.93 4.38 100.0 MIR199A1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 5.00 100.00 0.04 100.0 MIR487B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 1297.82 66.59 9.36 68.38 MIR93-201 miRNA upper lobe of left lung (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 531.95 27.29 3.84 33.39 MIR93-201 miRNA upper lobe of left lung (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 2246.00 82.12 16.20 88.63 MIR532-201 miRNA upper lobe of left lung (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 218.00 86.51 1.57 100.0 MIR15B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 991.00 84.77 7.15 100.0 MIR150-201 miRNA upper lobe of left lung (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 67.00 54.92 0.48 100.0 MIR542-201 miRNA upper lobe of left lung (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 1274.00 80.94 9.19 100.0 MIR500A-201 miRNA upper lobe of left lung (Tissue)