ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 527.00 16.01 3.80 100.0 SNORD98-201 snoRNA upper lobe of left lung (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 64884.95 67.50 467.88 71.43 MIR106AHG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 11.25 0.01 0.08 27.44 MIR106AHG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 29.82 0.03 0.22 72.73 MIR106AHG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 71.00 39.44 0.51 100.0 MEG8-222 lncRNA upper lobe of left lung (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 61.00 33.89 0.44 100.0 MEG8-222 lncRNA upper lobe of left lung (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 176.00 3.89 1.27 100.0 SNHG14-224 lncRNA upper lobe of left lung (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 1056.00 23.35 7.61 78.69 SNHG14-224 lncRNA upper lobe of left lung (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 770.00 17.03 5.55 70.13 SNHG14-224 lncRNA upper lobe of left lung (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 3008.07 3.78 21.69 45.66 5S_rRNA.20-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 492.00 9.74 3.55 100.0 HSPA9-211 retained intron upper lobe of left lung (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 2135.00 42.26 15.40 65.47 HSPA9-211 retained intron upper lobe of left lung (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 3762.00 81.41 27.13 100.0 DNM3OS-205 lncRNA upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 3198.00 0.66 23.06 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 678.00 0.14 4.89 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 5278.00 1.09 38.06 92.68 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 73.00 0.02 0.53 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 206.00 0.04 1.49 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 157.00 0.03 1.13 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 295124.00 61.10 2128.11 99.86 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 1006.00 0.21 7.25 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 6318.00 1.31 45.56 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 860.00 0.18 6.20 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 380.00 0.08 2.74 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 4609.00 0.95 33.24 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)