ENCFF744HOK

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR998CRC
Description: Part of ENCODE experiment ENCSR998CRC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 1880.00 17.68 5.76 100.0 LIMD1-AS1-204 lncRNA gastroesophageal sphincter (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 1987.00 18.69 6.09 87.23 LIMD1-AS1-204 lncRNA gastroesophageal sphincter (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 8116.00 58.18 24.87 75.2 MIR99AHG-262 lncRNA gastroesophageal sphincter (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 687.00 4.93 2.11 100.0 MIR99AHG-262 lncRNA gastroesophageal sphincter (Tissue)
ENST00000660376.1 ENST00000660376.1_1_78_+ 1–78 2.00 0.36 0.01 100.0 SNHG14-266 lncRNA gastroesophageal sphincter (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 144.00 78.69 0.44 100.0 SNHG14-270 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 251.00 0.68 0.77 100.0 SNHG14-275 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 67.00 57.26 0.21 84.81 MIR9-2HG-225 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 167.00 27.93 0.51 100.0 MEG8-233 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 180.00 30.10 0.55 100.0 MEG8-233 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 1117.00 43.72 3.42 100.0 SNHG14-278 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 92.00 3.60 0.28 87.62 SNHG14-278 lncRNA gastroesophageal sphincter (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 1428.00 56.71 4.38 100.0 MEG8-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 330.00 13.11 1.01 100.0 MEG8-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 850.00 91.20 2.61 100.0 SNHG17-252 lncRNA gastroesophageal sphincter (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 566.00 8.07 1.73 54.84 SNHG14-288 lncRNA gastroesophageal sphincter (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 6115.00 87.18 18.74 97.45 SNHG14-288 lncRNA gastroesophageal sphincter (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 29.00 4.75 0.09 100.0 SNHG14-295 lncRNA gastroesophageal sphincter (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 178.00 37.63 0.55 100.0 MEG8-240 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 13.00 0.53 0.04 100.0 SNHG14-303 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 86.00 8.97 0.26 100.0 SNHG14-306 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 10.00 1.04 0.03 100.0 SNHG14-306 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 380.00 39.62 1.16 99.48 SNHG14-306 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 10.00 1.04 0.03 100.0 SNHG14-306 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 27.00 2.97 0.08 100.0 ENST00000666735 lncRNA gastroesophageal sphincter (Tissue)