ENCFF744HOK

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR998CRC
Description: Part of ENCODE experiment ENCSR998CRC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 20.00 3.77 0.06 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 33.00 3.08 0.10 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 21.00 1.93 0.06 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 1673.00 70.41 5.13 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 316.00 94.33 0.97 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 19581.00 42.59 60.01 91.73 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 174.00 0.38 0.53 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 26.00 0.05 0.08 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 2512.00 71.04 7.70 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 62.00 1.42 0.19 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 82.00 1.57 0.25 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 627.00 12.02 1.92 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 90.00 1.72 0.28 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 5.00 11.36 0.02 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA gastroesophageal sphincter (Tissue)