ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 1791.00 49.64 11.86 100.0 RBMX-210 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 523.00 14.50 3.46 100.0 RBMX-210 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 39.00 1.08 0.26 100.0 RBMX-210 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 60.00 2.48 0.40 100.0 RPL4-214 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 1.00 0.04 0.01 100.0 RPL4-214 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 52.49 2.53 0.35 57.05 POLG-DT-202 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 30.32 1.46 0.20 39.38 POLG-DT-202 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 4878.00 22.14 32.31 100.0 ENST00000570843 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 188.00 59.68 1.25 100.0 MIR497HG-207 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 993099.00 99.78 6578.50 99.94 MIR22HG-212 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 55.00 6.80 0.36 23.71 SNORD53B-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 12.00 1.48 0.08 63.16 SNORD53B-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 177.00 21.88 1.17 76.29 SNORD53B-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 790.00 91.86 5.23 100.0 ENST00000578036 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 269.00 16.69 1.78 100.0 RPL23A-207 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 8526.00 92.23 56.48 100.0 MIR744-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 112.00 67.88 0.74 100.0 MIR378C-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 11.00 23.91 0.07 42.31 MIR142HG-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 3.00 6.52 0.02 100.0 MIR142HG-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 6.00 13.04 0.04 21.43 MIR142HG-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 2.49 0.06 0.02 83.14 RPL23A-208 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 1.50 0.03 0.01 74.93 RPL23A-208 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 2127.00 48.11 14.09 75.75 RPL23A-208 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 1521.00 34.40 10.08 87.41 RPL23A-208 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 5.00 0.19 0.03 100.0 MIR133A1HG-202 lncRNA trophoblast cell (In vitro differentiated cells)