ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 894.00 1.08 5.03 84.1 MIR28-201 miRNA upper lobe of left lung (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 1052.00 1.28 5.92 100.0 MIR28-201 miRNA upper lobe of left lung (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 828.00 69.87 4.66 100.0 MIR183-201 miRNA upper lobe of left lung (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 355.00 5.82 2.00 100.0 MIR145-201 miRNA upper lobe of left lung (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 4830.00 79.17 27.17 100.0 MIR145-201 miRNA upper lobe of left lung (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 13085.00 96.98 73.61 98.57 MIR186-201 miRNA upper lobe of left lung (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 1283.00 80.74 7.22 100.0 MIR200B-201 miRNA upper lobe of left lung (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 270.00 44.05 1.52 100.0 MIR218-1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 46575.00 89.77 262.00 94.81 MIR181B2-201 miRNA upper lobe of left lung (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 158598.00 90.70 892.15 91.29 MIR10B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 26.00 6.84 0.15 100.0 MIR130B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 129.97 34.20 0.73 56.51 MIR130B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 171.26 45.07 0.96 52.06 MIR130B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 1468.00 16.26 8.26 100.0 MIR199A1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 5.00 100.00 0.03 100.0 MIR487B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 510.43 24.35 2.87 30.35 MIR93-201 miRNA upper lobe of left lung (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 1438.50 68.63 8.09 71.71 MIR93-201 miRNA upper lobe of left lung (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 2874.00 80.50 16.17 87.04 MIR532-201 miRNA upper lobe of left lung (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 641.00 89.65 3.61 100.0 MIR15B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 3227.00 80.03 18.15 100.0 MIR150-201 miRNA upper lobe of left lung (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 56.00 56.57 0.32 100.0 MIR542-201 miRNA upper lobe of left lung (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 40.00 3.94 0.23 100.0 MIR500A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 807.00 79.51 4.54 100.0 MIR500A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 2088.00 0.65 11.75 100.0 MIR30A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 60594.00 18.83 340.86 86.2 MIR30A-201 miRNA upper lobe of left lung (Tissue)