ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 11232.00 22.27 63.18 45.86 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 304.00 0.60 1.71 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 3994.00 36.96 22.47 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 322.00 2.64 1.81 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 8.00 0.15 0.05 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 468.00 8.86 2.63 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 2384.00 45.12 13.41 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA upper lobe of left lung (Tissue)