ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 273.00 0.28 1.54 100.0 SNORD101-201 snoRNA upper lobe of left lung (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 78969.00 97.45 444.22 100.0 SNORD37-201 snoRNA upper lobe of left lung (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 7866.00 87.91 44.25 100.0 SNORD59A-201 snoRNA upper lobe of left lung (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 48.00 8.26 0.27 100.0 SNORA7B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 173.00 35.67 0.97 100.0 Y_RNA.555-201 misc RNA upper lobe of left lung (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 19155.00 92.86 107.75 94.27 MIR25-201 miRNA upper lobe of left lung (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 17463.00 88.79 98.23 95.53 MIR99B-201 miRNA upper lobe of left lung (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 2258.00 36.34 12.70 76.08 MIR23B-201 miRNA upper lobe of left lung (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 3439.00 55.35 19.35 91.24 MIR23B-201 miRNA upper lobe of left lung (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 2263.00 67.65 12.73 100.0 MIR203A-201 miRNA upper lobe of left lung (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 597.00 7.38 3.36 100.0 MIR199B-201 miRNA upper lobe of left lung (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 6553.00 81.03 36.86 90.64 MIR199B-201 miRNA upper lobe of left lung (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 8239.00 91.68 46.35 100.0 MIR30B-201 miRNA upper lobe of left lung (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 1423.00 91.45 8.00 100.0 MIR181D-201 miRNA upper lobe of left lung (Tissue)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 129.00 88.97 0.73 100.0 MIR508-201 miRNA upper lobe of left lung (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 120.00 94.49 0.68 100.0 MIR215-201 miRNA upper lobe of left lung (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 1705.00 0.17 9.59 100.0 MIR181A2-201 miRNA upper lobe of left lung (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 71963.00 97.65 404.81 98.75 MIR191-201 miRNA upper lobe of left lung (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 11.00 73.33 0.06 100.0 MIR149-201 miRNA upper lobe of left lung (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 2820.00 92.34 15.86 99.05 MIR181C-201 miRNA upper lobe of left lung (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 100.00 3.27 0.56 100.0 MIR181C-201 miRNA upper lobe of left lung (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 69.00 67.65 0.39 100.0 MIR194-1-201 miRNA upper lobe of left lung (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 238.00 70.83 1.34 73.68 MIR128-2-201 miRNA upper lobe of left lung (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 971.00 79.79 5.46 89.16 MIR99A-201 miRNA upper lobe of left lung (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 894.00 1.08 5.03 84.1 MIR28-201 miRNA upper lobe of left lung (Tissue)