ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 60594.00 18.83 340.86 86.2 MIR30A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 14447.00 4.49 81.27 100.0 MIR30A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 93493.00 92.54 525.92 95.13 MIR27B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 590.00 0.58 3.32 100.0 MIR27B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 93.00 86.92 0.52 100.0 MIR196A2-201 miRNA upper lobe of left lung (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 5.00 45.45 0.03 100.0 MIR577-201 miRNA upper lobe of left lung (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 38.00 73.08 0.21 86.36 MIR654-201 miRNA upper lobe of left lung (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 210.00 98.13 1.18 100.0 MIR204-201 miRNA upper lobe of left lung (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 895.00 88.53 5.03 100.0 MIR152-201 miRNA upper lobe of left lung (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 27.00 41.54 0.15 100.0 MIR138-1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 3240.00 85.20 18.23 100.0 MIR30C1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 320.00 86.96 1.80 100.0 MIR660-201 miRNA upper lobe of left lung (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 251.00 8.19 1.41 100.0 MIR125B1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 2115.00 69.03 11.90 83.01 MIR125B1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 24.00 57.14 0.14 100.0 MIR493-201 miRNA upper lobe of left lung (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 4.00 9.52 0.02 100.0 MIR493-201 miRNA upper lobe of left lung (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 33741.80 28.66 189.81 30.85 MIR182-201 miRNA upper lobe of left lung (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 72127.61 61.26 405.73 65.61 MIR182-201 miRNA upper lobe of left lung (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 11228.00 89.57 63.16 92.9 MIR100-201 miRNA upper lobe of left lung (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 339.00 93.91 1.91 100.0 MIR301A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 667.00 7.97 3.75 47.47 MIR130A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 7617.00 91.05 42.85 96.96 MIR130A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 451097.00 97.92 2537.53 98.6 MIRLET7F2-201 miRNA upper lobe of left lung (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 699.00 75.73 3.93 100.0 MIR652-201 miRNA upper lobe of left lung (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 5.00 31.25 0.03 100.0 MIR653-201 miRNA upper lobe of left lung (Tissue)