ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 397.00 15.05 2.23 85.38 7SK.1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 905.00 50.73 5.09 100.0 RNA5SP77-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 394.00 21.64 2.22 100.0 SNORD114-22-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 1389.00 76.28 7.81 100.0 SNORD114-22-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 11012.00 76.61 61.95 100.0 SNORD6-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 689.00 4.79 3.88 100.0 SNORD6-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 1764.00 9.77 9.92 100.0 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 3014.56 16.70 16.96 64.21 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 5321.00 29.48 29.93 98.1 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 525.00 2.91 2.95 100.0 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 2645.00 14.65 14.88 94.26 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 1571.92 8.71 8.84 33.48 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 265.00 1.47 1.49 100.0 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 782790.00 96.88 4403.38 97.95 MIR146B-201 miRNA upper lobe of left lung (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 40812.00 96.69 229.58 100.0 SNHG20-201 lncRNA upper lobe of left lung (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 91.00 10.56 0.51 100.0 ATP5MK-205 protein coding upper lobe of left lung (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 144.00 16.71 0.81 100.0 ATP5MK-205 protein coding upper lobe of left lung (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 13.00 13.98 0.07 100.0 LINC01556-201 lncRNA upper lobe of left lung (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 158.00 43.17 0.89 100.0 ATAD3A-202 protein coding upper lobe of left lung (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 69.00 6.48 0.39 30.13 TMC5-202 protein coding upper lobe of left lung (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 14.00 45.16 0.08 100.0 ZMYM2-203 protein coding upper lobe of left lung (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 178.00 11.22 1.00 100.0 RNVU1-7-201 snRNA upper lobe of left lung (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 274.00 65.39 1.54 100.0 Y_RNA.389-201 misc RNA upper lobe of left lung (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 273.00 0.28 1.54 100.0 SNORD101-201 snoRNA upper lobe of left lung (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 1863.00 1.94 10.48 100.0 SNORD101-201 snoRNA upper lobe of left lung (Tissue)