ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 4797.92 40.10 26.99 60.16 RNA5-8SN2-201 rRNA upper lobe of left lung (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 3.00 37.50 0.02 100.0 MIR7974-201 miRNA upper lobe of left lung (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 1136.00 3.70 6.39 100.0 U2.3-201 snRNA upper lobe of left lung (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 217.00 0.71 1.22 74.57 U2.3-201 snRNA upper lobe of left lung (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 10.00 0.03 0.06 100.0 U2.3-201 snRNA upper lobe of left lung (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 4803.00 15.65 27.02 100.0 U2.3-201 snRNA upper lobe of left lung (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 2713.00 8.84 15.26 100.0 U2.3-201 snRNA upper lobe of left lung (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 1187.00 4.94 6.68 100.0 U2.6-201 snRNA upper lobe of left lung (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 201.00 0.17 1.13 12.84 ENST00000619323 lncRNA upper lobe of left lung (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 114754.00 96.88 645.52 98.19 ENST00000619323 lncRNA upper lobe of left lung (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 694.00 30.59 3.90 100.0 SCARNA4-202 scaRNA upper lobe of left lung (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 527.00 67.74 2.96 100.0 ENST00000625572 miRNA upper lobe of left lung (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 1436.00 88.97 8.08 100.0 ENST00000630615 snoRNA upper lobe of left lung (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 98.00 18.32 0.55 100.0 DMRT2-209 protein coding upper lobe of left lung (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 224.00 41.87 1.26 100.0 DMRT2-209 protein coding upper lobe of left lung (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 1701.00 64.80 9.57 100.0 SNORD98-201 snoRNA upper lobe of left lung (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 373.00 14.21 2.10 100.0 SNORD98-201 snoRNA upper lobe of left lung (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 81297.15 64.75 457.32 69.28 MIR106AHG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 6.92 0.01 0.04 20.98 MIR106AHG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 26.41 0.02 0.15 80.04 MIR106AHG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 70.00 72.92 0.39 100.0 MEG8-222 lncRNA upper lobe of left lung (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 11.00 11.46 0.06 100.0 MEG8-222 lncRNA upper lobe of left lung (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 39.00 2.14 0.22 100.0 SNHG14-224 lncRNA upper lobe of left lung (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 362.00 19.85 2.04 72.84 SNHG14-224 lncRNA upper lobe of left lung (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 389.00 21.33 2.19 72.3 SNHG14-224 lncRNA upper lobe of left lung (Tissue)