ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 1599.00 90.44 8.99 100.0 MIR769-201 miRNA upper lobe of left lung (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 67.00 60.91 0.38 100.0 KRTAP19-1-201 protein coding upper lobe of left lung (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 7.00 15.22 0.04 100.0 MIR708-201 miRNA upper lobe of left lung (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 674.00 92.84 3.79 100.0 MIR509-3-201 miRNA upper lobe of left lung (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 28.00 96.55 0.16 100.0 MIR301B-201 miRNA upper lobe of left lung (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 721.00 58.29 4.06 80.2 RNU1-82P-201 snRNA upper lobe of left lung (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 321.00 2.16 1.81 100.0 SNORD66-201 snoRNA upper lobe of left lung (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 1401.00 9.43 7.88 100.0 SNORD66-201 snoRNA upper lobe of left lung (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 4476.00 30.13 25.18 72.04 SNORD66-201 snoRNA upper lobe of left lung (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 116.00 32.86 0.65 100.0 U3.17-201 snoRNA upper lobe of left lung (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 7431.00 93.86 41.80 100.0 SNORD17-201 snoRNA upper lobe of left lung (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 116.00 44.44 0.65 100.0 SNORD72-201 snoRNA upper lobe of left lung (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 396.00 71.10 2.23 100.0 SNORD70B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 2476.00 57.29 13.93 93.54 RNY4P18-201 misc RNA upper lobe of left lung (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 2234.00 10.30 12.57 100.0 SNORD69-201 snoRNA upper lobe of left lung (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 1122.00 5.17 6.31 100.0 SNORD69-201 snoRNA upper lobe of left lung (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 2411.00 11.12 13.56 100.0 SNORD69-201 snoRNA upper lobe of left lung (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 12911.00 59.53 72.63 100.0 SNORD69-201 snoRNA upper lobe of left lung (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 105.00 0.57 0.59 100.0 B4GALNT2-202 protein coding upper lobe of left lung (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 12560.00 68.71 70.65 90.31 B4GALNT2-202 protein coding upper lobe of left lung (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 1558.00 89.75 8.76 100.0 NDE1-202 protein coding upper lobe of left lung (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 6.00 66.67 0.03 100.0 MIR450B-201 miRNA upper lobe of left lung (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 57.00 20.88 0.32 100.0 MIR887-201 miRNA upper lobe of left lung (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 21.00 100.00 0.12 100.0 MIR889-201 miRNA upper lobe of left lung (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 134.00 95.71 0.75 100.0 MIR548K-201 miRNA upper lobe of left lung (Tissue)