ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 497.00 62.83 2.80 100.0 MIR320B2-201 miRNA upper lobe of left lung (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 1.00 33.33 0.01 100.0 MIR1271-201 miRNA upper lobe of left lung (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 109368.00 92.53 615.22 100.0 SNORD100-201 snoRNA upper lobe of left lung (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 2229.00 1.89 12.54 100.0 SNORD100-201 snoRNA upper lobe of left lung (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 566.00 0.48 3.18 100.0 SNORD100-201 snoRNA upper lobe of left lung (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 1286.00 1.09 7.23 100.0 SNORD100-201 snoRNA upper lobe of left lung (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 3613.00 70.94 20.32 100.0 SNORD111B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 331.00 1.51 1.86 100.0 RNU2-36P-201 snRNA upper lobe of left lung (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 377.00 1.72 2.12 100.0 RNU2-36P-201 snRNA upper lobe of left lung (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 67562.00 93.68 380.05 99.48 SNORD19C-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 2702.00 3.75 15.20 100.0 SNORD19C-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 1298.00 59.13 7.30 100.0 SNORD12B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 136.00 6.20 0.77 100.0 SNORD12B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 5.00 1.61 0.03 100.0 Y_RNA.609-201 misc RNA upper lobe of left lung (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 10.00 18.87 0.06 100.0 Y_RNA.612-201 misc RNA upper lobe of left lung (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 333.00 13.67 1.87 100.0 SNORD71-201 snoRNA upper lobe of left lung (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 73.00 3.00 0.41 100.0 SNORD71-201 snoRNA upper lobe of left lung (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 11972.00 89.63 67.35 96.27 MIR194-2HG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 1254.00 9.39 7.05 43.65 MIR194-2HG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 3.00 60.00 0.02 100.0 RPS7P15-201 processed pseudogene upper lobe of left lung (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 13.00 0.43 0.07 100.0 SNORD62B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 1014.00 33.29 5.70 90.54 SNORD62B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 551.00 18.09 3.10 100.0 SNORD62B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 242.00 7.94 1.36 100.0 SNORD62B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 50.00 100.00 0.28 100.0 MRPL32-203 nonsense mediated decay upper lobe of left lung (Tissue)