ENCFF694VGD

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR996VHB
Description: Part of ENCODE experiment ENCSR996VHB. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 30629.00 23.38 172.30 71.3 MT-TY-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 177.00 0.14 1.00 100.0 MT-TY-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 34769.00 26.54 195.58 89.37 MT-TY-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 2780.00 2.12 15.64 100.0 MT-TY-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 29563.00 22.56 166.30 100.0 MT-TY-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 8959.00 80.69 50.40 100.0 MT-TD-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 2928.00 0.21 16.47 100.0 MT-TK-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 11081.00 0.78 62.33 100.0 MT-TK-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 1384962.00 97.74 7790.73 100.0 MT-TK-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 576.00 0.04 3.24 100.0 MT-TK-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 1623.00 19.88 9.13 77.69 MT-TS2-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 212.00 2.60 1.19 100.0 MT-TS2-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 1608.00 19.69 9.05 100.0 MT-TS2-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 710.00 14.88 3.99 100.0 MT-TL2-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 102.00 0.03 0.57 100.0 MT-TE-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 891.00 0.24 5.01 86.0 MT-TE-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 750.00 0.20 4.22 70.56 MT-TE-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 313.00 0.08 1.76 33.09 MT-TE-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 24.00 0.01 0.14 100.0 MT-TE-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 327706.00 87.59 1843.42 93.19 MT-TE-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 1704.00 0.46 9.59 100.0 MT-TE-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 19.00 32.20 0.11 100.0 MIR196A1-201 miRNA upper lobe of left lung (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 1141.00 30.48 6.42 100.0 MT-RNR1-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 181.00 82.27 1.02 100.0 MIR454-201 miRNA upper lobe of left lung (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 375.00 67.45 2.11 100.0 MIR501-201 miRNA upper lobe of left lung (Tissue)