ENCFF682YQJ

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR593MVW
Description: Part of ENCODE experiment ENCSR593MVW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 286.00 0.98 1.39 100.0 RNA5SP486-201 rRNA pseudogene spleen (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 9413.00 90.55 45.84 100.0 SCARNA5-201 scaRNA spleen (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 372.00 0.25 1.81 60.0 RNY4-201 misc RNA spleen (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1119.00 0.75 5.45 64.68 RNY4-201 misc RNA spleen (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 646.00 0.43 3.15 100.0 RNY4-201 misc RNA spleen (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 6159.00 4.11 29.99 75.53 RNY4-201 misc RNA spleen (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 97619.00 65.20 475.35 97.19 RNY4-201 misc RNA spleen (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 19251.00 12.86 93.74 96.56 RNY4-201 misc RNA spleen (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 807.00 0.54 3.93 100.0 RNY4-201 misc RNA spleen (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 730.00 0.49 3.55 100.0 RNY4-201 misc RNA spleen (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 4073.00 2.72 19.83 59.1 RNY4-201 misc RNA spleen (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 179.00 0.12 0.87 100.0 RNY4-201 misc RNA spleen (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 280.00 0.19 1.36 100.0 RNY4-201 misc RNA spleen (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 8993.00 79.22 43.79 88.73 MIR3142HG-201 lncRNA spleen (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 4135.00 7.20 20.14 100.0 MIR151A-201 miRNA spleen (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 47082.00 81.95 229.27 90.07 MIR151A-201 miRNA spleen (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 1528.00 99.22 7.44 100.0 DENND3-221 protein coding spleen (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 2471.00 3.57 12.03 100.0 WDR74-204 protein coding spleen (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 5869.00 8.48 28.58 69.02 WDR74-204 protein coding spleen (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 698.00 1.01 3.40 100.0 WDR74-204 protein coding spleen (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 2998.00 4.33 14.60 100.0 WDR74-204 protein coding spleen (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 4756.00 6.87 23.16 50.29 WDR74-204 protein coding spleen (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 4702.00 6.79 22.90 49.71 WDR74-204 protein coding spleen (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 537.00 23.42 2.61 100.0 SCARNA9-201 lncRNA spleen (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 95442.00 96.48 464.75 100.0 TAF1D-215 retained intron spleen (Tissue)