ENCFF682YQJ

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR593MVW
Description: Part of ENCODE experiment ENCSR593MVW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 271.00 40.75 1.32 100.0 HCN2-201 protein coding spleen (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 19.00 2.22 0.09 100.0 ATP5MC3-201 protein coding spleen (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 235.00 88.35 1.14 100.0 CDC25A-201 protein coding spleen (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 184.00 49.46 0.90 100.0 RUNX3-201 protein coding spleen (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 324.00 65.32 1.58 100.0 BLOC1S4-201 protein coding spleen (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 396.00 22.12 1.93 100.0 ATAD5-201 protein coding spleen (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 182.00 12.52 0.89 100.0 SLITRK5-201 protein coding spleen (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 8.00 53.33 0.04 100.0 HASPIN-201 protein coding spleen (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 472.00 96.72 2.30 100.0 ATG101-201 protein coding spleen (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 28.00 57.14 0.14 100.0 PRICKLE1-201 protein coding spleen (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 50.00 92.59 0.24 100.0 MIR133A2-201 miRNA spleen (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 11.00 23.40 0.05 100.0 PBLD-204 protein coding spleen (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 441538.00 88.52 2150.07 95.76 MIRLET7BHG-201 lncRNA spleen (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 19890.00 3.99 96.85 78.79 MIRLET7BHG-201 lncRNA spleen (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 13.00 9.49 0.06 50.0 MIR375-201 miRNA spleen (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 124.00 90.51 0.60 98.41 MIR375-201 miRNA spleen (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 5058.00 46.22 24.63 100.0 MIR30E-201 miRNA spleen (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 4920.00 44.96 23.96 100.0 MIR30E-201 miRNA spleen (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 697.00 40.50 3.39 100.0 MIR29A-201 miRNA spleen (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 114.00 84.44 0.56 100.0 MIR345-201 miRNA spleen (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 25057.00 98.68 122.01 100.0 MIR16-2-201 miRNA spleen (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 2198.00 96.40 10.70 100.0 MIR340-201 miRNA spleen (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 10.00 0.44 0.05 100.0 MIR340-201 miRNA spleen (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 1500.00 41.33 7.30 100.0 MIR107-201 miRNA spleen (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 302.00 83.89 1.47 85.55 MIR381-201 miRNA spleen (Tissue)