ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 10476.00 38.54 42.64 65.3 ENST00000655317 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 947.00 3.48 3.85 100.0 ENST00000655317 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 9956.00 36.63 40.53 46.01 ENST00000655317 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 194.00 0.71 0.79 100.0 ENST00000655317 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 179.00 2.89 0.73 91.79 LINC01962-202 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 3805.00 61.36 15.49 100.0 LINC01962-202 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 353.00 5.69 1.44 100.0 LINC01962-202 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 7788.00 60.63 31.70 90.66 SNHG14-241 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 5216.00 94.15 21.23 100.0 MEG8-228 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 3073.00 52.32 12.51 100.0 SNHG14-254 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 758.00 9.68 3.09 100.0 SNHG14-261 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 4127.00 52.73 16.80 88.56 SNHG14-261 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 112.00 2.09 0.46 100.0 LIMD1-AS1-204 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 253.00 4.73 1.03 100.0 LIMD1-AS1-204 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 1285.00 24.03 5.23 91.98 LIMD1-AS1-204 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 12251.00 69.13 49.87 86.08 MIR99AHG-262 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 1373.00 7.75 5.59 100.0 MIR99AHG-262 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000660376.1 ENST00000660376.1_1_78_+ 1–78 3.00 1.45 0.01 100.0 SNHG14-266 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 471.00 84.11 1.92 100.0 SNHG14-270 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 685.00 2.28 2.79 100.0 SNHG14-275 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 461.00 75.95 1.88 94.86 MIR9-2HG-225 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 598.00 51.86 2.43 100.0 MEG8-233 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 156.00 13.53 0.64 100.0 MEG8-233 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 2625.00 45.49 10.69 100.0 SNHG14-278 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 264.00 4.57 1.07 97.42 SNHG14-278 lncRNA esophagus muscularis mucosa (Tissue)