ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 1458.00 3.76 5.94 93.46 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 85.00 0.22 0.35 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 1879.00 4.85 7.65 54.27 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 20.00 0.05 0.08 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 70.00 0.18 0.28 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 1047.00 2.70 4.26 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 75.00 0.19 0.31 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 67.00 0.17 0.27 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 6165.00 15.90 25.10 46.41 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 230.00 0.59 0.94 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 19965.00 51.50 81.27 85.83 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 7273.00 0.90 29.61 100.0 MIRLET7A1HG-203 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 1444.00 89.63 5.88 100.0 MEG8-225 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 40767.00 85.62 165.95 100.0 SNHG29-232 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 66.00 0.14 0.27 100.0 SNHG29-232 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 797.00 1.67 3.24 100.0 SNHG29-232 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 9.00 0.02 0.04 100.0 SNHG29-232 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 878.00 1.84 3.57 100.0 SNHG29-232 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 4067.00 8.54 16.56 100.0 SNHG29-232 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 184.00 0.67 0.75 100.0 SNHG14-234 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 13626.00 49.41 55.47 95.09 SNHG14-234 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 24.00 0.09 0.10 100.0 SNHG14-234 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 1183.00 4.29 4.82 100.0 SNHG14-234 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 2509.00 9.10 10.21 100.0 SNHG14-234 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 3580.00 12.98 14.57 91.58 SNHG14-234 lncRNA esophagus muscularis mucosa (Tissue)