ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 782.00 47.02 3.18 100.0 MEG8-234 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 299.00 17.98 1.22 100.0 MEG8-234 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 1514.00 94.39 6.16 100.0 SNHG17-252 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 3679.00 14.70 14.98 67.69 SNHG14-288 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 19941.00 79.66 81.17 96.33 SNHG14-288 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 32.00 11.43 0.13 100.0 SNHG14-295 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 207.00 60.00 0.84 100.0 MEG8-240 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 7.00 0.13 0.03 100.0 SNHG14-303 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 60.00 10.40 0.24 100.0 SNHG14-306 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 351.00 60.83 1.43 99.15 SNHG14-306 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 5.00 0.87 0.02 100.0 SNHG14-306 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 56.00 4.32 0.23 100.0 ENST00000666735 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 35.00 2.70 0.14 100.0 ENST00000666735 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 1763.00 86.13 7.18 100.0 MEG8-242 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 922.54 17.27 3.76 27.48 SNHG14-312 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 2388.71 44.72 9.72 71.16 SNHG14-312 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 13.00 0.24 0.05 100.0 SNHG14-312 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 126.00 0.24 0.51 100.0 MEG8-244 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 222.00 0.43 0.90 100.0 MEG8-244 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 50631.00 98.39 206.10 99.8 MEG8-244 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 982.00 0.12 4.00 100.0 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 6369.00 0.79 25.93 98.64 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 1609.27 0.20 6.55 63.56 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 1499.00 0.19 6.10 73.62 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 219122.00 27.24 891.97 99.65 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)