ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 966.00 1.93 3.51 61.02 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 2360.00 4.72 8.58 93.39 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 47.00 0.09 0.17 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 1984.00 3.97 7.22 48.48 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 31.00 0.06 0.11 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 97.00 0.19 0.35 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 79.00 0.16 0.29 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 8217.00 16.43 29.89 50.75 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 151.00 0.30 0.55 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 25958.00 51.89 94.42 84.33 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 4014.00 1.06 14.60 100.0 MIRLET7A1HG-203 lncRNA sigmoid colon (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 3461.00 94.43 12.59 100.0 MEG8-225 lncRNA sigmoid colon (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 3294.00 67.06 11.98 100.0 SNHG29-232 lncRNA sigmoid colon (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 173.00 3.52 0.63 100.0 SNHG29-232 lncRNA sigmoid colon (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 675.00 13.74 2.46 100.0 SNHG29-232 lncRNA sigmoid colon (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 7.00 0.14 0.03 100.0 SNHG29-232 lncRNA sigmoid colon (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 289.00 3.86 1.05 100.0 SNHG14-234 lncRNA sigmoid colon (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 27.00 0.36 0.10 100.0 SNHG14-234 lncRNA sigmoid colon (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 9301.00 27.15 33.83 100.0 ENST00000655317 lncRNA sigmoid colon (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 9225.00 26.93 33.55 70.52 ENST00000655317 lncRNA sigmoid colon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 201.00 1.51 0.73 74.17 LINC01962-202 lncRNA sigmoid colon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 10814.00 81.09 39.33 100.0 LINC01962-202 lncRNA sigmoid colon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 322.00 2.41 1.17 100.0 LINC01962-202 lncRNA sigmoid colon (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 17057.00 96.40 62.04 100.0 MEG8-228 lncRNA sigmoid colon (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 155.00 2.68 0.56 100.0 LIMD1-AS1-204 lncRNA sigmoid colon (Tissue)