ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 1775.00 30.65 6.46 89.47 LIMD1-AS1-204 lncRNA sigmoid colon (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 9016.00 67.68 32.79 84.32 MIR99AHG-262 lncRNA sigmoid colon (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 1747.00 13.11 6.35 100.0 MIR99AHG-262 lncRNA sigmoid colon (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 494.00 84.01 1.80 93.56 MIR9-2HG-225 lncRNA sigmoid colon (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 847.00 33.24 3.08 100.0 MEG8-233 lncRNA sigmoid colon (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 799.00 31.36 2.91 100.0 MEG8-233 lncRNA sigmoid colon (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 2459.00 58.88 8.94 100.0 MEG8-234 lncRNA sigmoid colon (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 430.00 10.30 1.56 100.0 MEG8-234 lncRNA sigmoid colon (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 498.00 75.91 1.81 100.0 MEG8-240 lncRNA sigmoid colon (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 32.00 23.53 0.12 100.0 SNHG14-306 lncRNA sigmoid colon (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 3.00 2.21 0.01 100.0 SNHG14-306 lncRNA sigmoid colon (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 76.00 6.44 0.28 100.0 ENST00000666735 lncRNA sigmoid colon (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 20.00 1.69 0.07 100.0 ENST00000666735 lncRNA sigmoid colon (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 3319.00 87.02 12.07 100.0 MEG8-242 lncRNA sigmoid colon (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 271.00 0.17 0.99 100.0 MEG8-244 lncRNA sigmoid colon (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 332.00 0.21 1.21 100.0 MEG8-244 lncRNA sigmoid colon (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 153647.00 98.70 558.87 99.75 MEG8-244 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 1007.00 0.07 3.66 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 10.00 0.00 0.04 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 3449.00 0.23 12.55 98.32 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 2524.45 0.17 9.18 62.12 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 2549.00 0.17 9.27 78.17 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 1148356.00 75.28 4177.01 99.25 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 1562.00 0.10 5.68 82.82 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 23704.00 1.55 86.22 98.48 SNHG1-248 lncRNA sigmoid colon (Tissue)