ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 543.00 0.04 1.98 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 832.00 0.06 3.03 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 251.00 0.02 0.91 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 261.00 0.02 0.95 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 1546.00 0.11 5.62 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 2.00 0.00 0.01 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 169.00 0.01 0.61 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 1710.00 0.12 6.22 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 9359.00 0.64 34.04 83.95 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 4735.00 0.33 17.22 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 136.00 0.01 0.49 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 257.00 0.02 0.93 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 1094.00 0.08 3.98 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 589302.00 40.52 2143.52 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 3.00 0.00 0.01 100.0 GAS5-230 retained intron sigmoid colon (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 93.00 14.31 0.34 100.0 FTX-219 lncRNA sigmoid colon (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 331.00 50.92 1.20 90.93 FTX-219 lncRNA sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 218.00 2.90 0.79 67.49 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 378.00 5.03 1.37 75.3 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 3195.00 42.54 11.62 82.35 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 105.00 1.40 0.38 32.51 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 1464.00 19.49 5.33 66.79 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 242.00 3.22 0.88 100.0 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 346.00 4.61 1.26 100.0 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 247.00 3.29 0.90 100.0 CTC1-214 protein coding sigmoid colon (Tissue)